STRINGSTRING
Phatr48819 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48819" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48819Predicted protein (681 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
 
  0.764
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
   
 
  0.764
Phatr12107
Predicted protein (460 aa)
   
 
  0.734
Phatr15948
Predicted protein (262 aa)
       
  0.702
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
     
  0.694
PGM_1
Mutase phosphoglucomutase (600 aa)
     
  0.694
GFA1
Glutamine-fructose-6-phosphate transaminase (606 aa)
   
 
  0.688
Phatr5857
Predicted protein (186 aa)
   
 
  0.669
GPI_3
Glucose-6-phosphate isomerase (518 aa)
   
 
  0.669
GPI_1
Glucose-6-phosphate isomerase (554 aa)
   
 
  0.669
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (12%) [HD]