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Phatr48846 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48846" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48846Predicted protein; Belongs to the NARF family (627 aa)    
Predicted Functional Partners:
Phatr47020
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (306 aa)
     
 
  0.934
Phatr9020
Predicted protein (364 aa)
     
 
  0.918
Phatr11954
Predicted protein (149 aa)
     
 
  0.911
Phatr38642
Predicted protein (587 aa)
     
   
  0.907
Phatr7755
Predicted protein (88 aa)
     
 
  0.819
Phatr43649
Predicted protein (775 aa)
     
 
  0.819
IscU
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
     
   
  0.800
Phatr45826
Predicted protein (238 aa)
           
  0.769
Phatr30667
Predicted protein; Belongs to the BolA/IbaG family (90 aa)
           
  0.764
Phatr14927
Predicted protein (87 aa)
           
  0.744
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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