STRINGSTRING
Phatr48911 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48911" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48911Predicted protein (631 aa)    
Predicted Functional Partners:
Phatr44863
Predicted protein (956 aa)
     
  0.745
Phatr20608
Predicted protein (830 aa)
     
  0.745
Phatr12107
Predicted protein (460 aa)
   
   
  0.648
Phatrdraft1572
Enolase (464 aa)
       
 
  0.625
Phatrdraft1192
Annotation not available (457 aa)
       
 
  0.625
Phatr41515
Enolase (437 aa)
       
 
  0.625
Phatr43677
Predicted protein (813 aa)
   
  0.603
Phatr38965
Predicted protein (1383 aa)
   
  0.603
Phatr26775
Predicted protein (593 aa)
   
  0.603
Phatr23306
Predicted protein (908 aa)
   
  0.603
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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