STRINGSTRING
Phatr48916 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48916" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48916Predicted protein (944 aa)    
Predicted Functional Partners:
Phatr48112
Predicted protein (387 aa)
     
 
  0.499
Phatr15423
Predicted protein (367 aa)
     
 
  0.499
Phatr54621
Glycosyl transferase, family 1 (433 aa)
       
  0.417
Phatr54068
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein (450 aa)
       
  0.417
SQD2
Glycosyl transferase, group 1 (507 aa)
       
  0.417
Phatr42467
Predicted protein (679 aa)
       
  0.417
Phatr22554
Mannosyltransferase (419 aa)
       
  0.417
Phatr14002
Beta-mannosyltransferase (398 aa)
       
  0.417
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%) [HD]