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STRINGSTRING
Phatr48918 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48918" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48918Predicted protein (306 aa)    
Predicted Functional Partners:
Phatr49227
Predicted protein (1675 aa)
     
   
  0.688
Phatr47538
Predicted protein (731 aa)
     
   
  0.688
Phatr9794
Predicted protein; Belongs to the membrane-bound acyltransferase family (404 aa)
     
   
  0.637
Phatr47706
Predicted protein (324 aa)
     
   
  0.628
Phatr46126
Predicted protein (164 aa)
     
 
  0.568
Phatr43671
Predicted protein (192 aa)
     
 
  0.568
Phatr43773
Predicted protein (398 aa)
       
 
  0.561
Phatr6934
Predicted protein (121 aa)
     
 
  0.548
Phatr45120
Predicted protein (530 aa)
     
 
  0.548
Phatr37086
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (226 aa)
       
 
  0.535
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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