STRINGSTRING
Phatr48918 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48918" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48918Predicted protein (306 aa)    
Predicted Functional Partners:
SKT1
Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)
       
      0.727
RPN12
Regulatory proteasome non-atpase subunit 12 (248 aa)
     
      0.617
RPN11
Regulatory proteasome non-atpase subunit 11 (311 aa)
       
      0.604
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
       
      0.586
Phatr24739
Predicted protein (1594 aa)
       
      0.586
Phatr6934
Predicted protein (121 aa)
       
 
  0.530
Phatr45120
Predicted protein (530 aa)
       
 
  0.530
PTD9
Desaturase delta 9 desaturase (333 aa)
       
      0.506
Phatr11391
Predicted protein (148 aa)
       
      0.452
Phatr44584
Predicted protein (533 aa)
       
 
  0.418
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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