• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr48924 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48924" - Arginyl-tRNA--protein transferase 1 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48924Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway (640 aa)    
Predicted Functional Partners:
Phatr50507
Predicted protein (285 aa)
           
  0.618
Phatr10391
Predicted protein (143 aa)
           
  0.618
Phatr49767
Predicted protein (2694 aa)
     
   
  0.613
Phatr49766
Predicted protein (1806 aa)
     
   
  0.613
Phatr8111
Protein yippee-like; Belongs to the yippee family (99 aa)
           
  0.610
Phatr42694
Predicted protein (910 aa)
           
  0.610
Phatr47503
Predicted protein (670 aa)
     
   
  0.583
Phatr40578
Predicted protein (860 aa)
     
   
  0.583
Phatr37731
Predicted protein (1373 aa)
     
   
  0.583
Phatr41746
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family (345 aa)
         
  0.575
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (13%) [HD]