STRINGSTRING
DEL protein (Phaeodactylum tricornutum) - STRING interaction network
"DEL" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DELPredicted protein (572 aa)    
Predicted Functional Partners:
CDC6
Predicted protein (1107 aa)
     
 
  0.592
Phatr14032
Predicted protein (467 aa)
       
      0.491
HSP70F
Heat shock protein Hsp70 (841 aa)
           
  0.480
MCM3
Predicted protein (551 aa)
     
   
  0.477
PetJ
Cytochrome c6, cytochrome c553 (133 aa)
           
  0.472
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
     
        0.441
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
     
        0.441
MCM5
Predicted protein (667 aa)
     
   
  0.432
GOS
Predicted protein (223 aa)
           
  0.430
Fba4
Cytosolic aldolase (299 aa)
           
  0.423
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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