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STRINGSTRING
PGK protein (Phaeodactylum tricornutum) - STRING interaction network
"PGK" - Phosphoglycerate kinase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGKPhosphoglycerate kinase (448 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
 
  0.993
TIM_1
Triosephosphate isomerase (268 aa)
 
  0.980
Phatrdraft1572
Predicted protein; Enolase (464 aa)
 
 
  0.910
Phatr50738
Triosephosphate isomerase (290 aa)
 
 
  0.907
PPdK
Predicted protein (1011 aa)
   
 
  0.906
Phatr18228
Triosephosphate isomerase (298 aa)
 
 
  0.905
GAPDH_3
Glyceraldehyde-3-phosphate dehydrogenase (351 aa)
  0.902
FbaC5
Fructose-bisphosphate aldolase (358 aa)
   
  0.900
GapC1
Glyceraldehyde-3-phosphate dehydrogenase (379 aa)
 
  0.880
GapC2b
Glyceraldehyde-3-phosphate dehydrogenase (334 aa)
 
  0.878
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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