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Phatr48999 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48999" - LCTP l-lactate permease in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48999LCTP l-lactate permease (689 aa)    
Predicted Functional Partners:
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.626
Phatr50804
Glycolate oxidase (431 aa)
   
   
  0.606
GOX
Glycolate oxidase (381 aa)
   
   
  0.606
Phatr46664
Predicted protein (691 aa)
 
   
  0.585
Phatr55040
D-lactate dehydrogenase (506 aa)
   
   
  0.464
Phatr44190
Predicted protein (554 aa)
   
   
  0.464
Phatr23292
L-galactono-1,4-lactone dehydrogenase (572 aa)
   
   
  0.464
D-LCR
D-lactate dehydrogenase (507 aa)
   
   
  0.464
Phatrdraft391
Predicted protein (749 aa)
       
 
  0.405
Phatrdraft387
Predicted protein (749 aa)
       
 
  0.405
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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