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TDH protein (Phaeodactylum tricornutum) - STRING interaction network
"TDH" - L-threonine ammonia-lyase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDHL-threonine ammonia-lyase (606 aa)    
Predicted Functional Partners:
Phatr24772
Predicted protein (801 aa)
   
   
  0.750
Phatr54355
Carboxylyase (667 aa)
   
  0.698
Phatr37341
Annotation not available (628 aa)
   
  0.698
Phatr23324
Predicted protein (176 aa)
       
 
  0.677
Phatrdraft1648
Predicted protein (646 aa)
       
 
  0.656
Phatr19615
Predicted protein (121 aa)
     
      0.652
rpl2
Predicted protein (257 aa)
       
      0.651
Phatr19025
Predicted protein (205 aa)
       
      0.651
Phatrdraft348
Predicted protein (521 aa)
   
  0.648
Phatr30967
Predicted protein (539 aa)
   
  0.648
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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