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Phatr49059 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49059" - Proteinase inhibitor in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49059Proteinase inhibitor (119 aa)    
Predicted Functional Partners:
sUbi
Ubiquitin-like protein (268 aa)
           
  0.510
sDer1-2
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (187 aa)
           
  0.497
SMP1
Metalloprotease (1028 aa)
           
  0.479
sCdc48
Predicted protein (797 aa)
           
  0.479
sDer1-1
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (163 aa)
           
  0.478
Cbs
Predicted protein (469 aa)
           
  0.476
Phatr30898
Vacuolar protein (429 aa)
           
  0.475
HSP90
Heat shock protein Hsp90 (780 aa)
           
  0.429
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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