STRINGSTRING
Phatr49149 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49149" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49149Predicted protein (570 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
       
  0.849
Phatr51005
DNA ligase (651 aa)
     
  0.781
Phatr10585
Predicted protein (337 aa)
     
  0.781
Phatr45122
Predicted protein (421 aa)
       
      0.661
RPN9
Regulatory proteasome non-atpase subunit 9 (409 aa)
       
      0.661
Phatr28219
Predicted protein (447 aa)
       
      0.661
RPN5
Regulatory proteasome non-atpase subunit 5 (457 aa)
       
      0.661
RPN12
Regulatory proteasome non-atpase subunit 12 (248 aa)
       
      0.661
RPN11
Regulatory proteasome non-atpase subunit 11 (311 aa)
       
      0.661
RPN1
Regulatory proteasome non-atpase subunit 1 (916 aa)
       
      0.661
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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