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STRINGSTRING
LAG1 protein (Phaeodactylum tricornutum) - STRING interaction network
"LAG1" - Longevity assurance protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAG1Longevity assurance protein (332 aa)    
Predicted Functional Partners:
Phatr10378
Predicted protein (486 aa)
     
   
  0.772
Phatr41807
Predicted protein (407 aa)
     
   
  0.763
Phatr44806
Predicted protein (585 aa)
     
   
  0.741
Phatr15730
Predicted protein (442 aa)
     
 
  0.729
Phatr48977
Predicted protein (354 aa)
     
   
  0.673
Phatr15852
Predicted protein (138 aa)
           
  0.671
Phatr15692
Predicted protein (109 aa)
     
 
  0.659
Phatr8827
Predicted protein (219 aa)
     
   
  0.657
Phatr10539
Predicted protein; Belongs to the protein kinase superfamily (328 aa)
     
 
  0.650
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
     
   
  0.606
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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