STRINGSTRING
FTHFS protein (Phaeodactylum tricornutum) - STRING interaction network
"FTHFS" - Fomate-tetrahydrofolate ligase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTHFSFomate-tetrahydrofolate ligase (666 aa)    
Predicted Functional Partners:
Phatr47067
Predicted protein (1237 aa)
   
 
  0.939
Phatr23623
Predicted protein (300 aa)
 
  0.935
Phatr17772
Predicted protein (1313 aa)
   
   
  0.808
GDCP
Glycine decarboxylase p-protein (1005 aa)
   
 
  0.784
Phatr12107
Predicted protein (460 aa)
       
  0.753
Phatr25204
Predicted protein (598 aa)
   
   
  0.745
METH
Methionine synthase (1245 aa)
       
  0.745
Phatr4402
Predicted protein (274 aa)
   
  0.743
Phatr28181
Predicted protein (365 aa)
   
  0.743
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine (464 aa)
   
  0.631
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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