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Phatr49253 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49253" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49253Predicted protein (566 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
       
  0.894
Phatr24739
Predicted protein (1594 aa)
       
  0.894
Phatr48393
Predicted protein (654 aa)
   
  0.797
Phatr42129
Annotation not available (479 aa)
   
  0.797
Phatr19949
Predicted protein (393 aa)
   
  0.797
Phatr45054
Predicted protein (429 aa)
   
 
  0.783
Phatr43667
Predicted protein (890 aa)
   
 
  0.783
GLO_1
Glyoxalase (229 aa)
   
 
  0.783
GLO_2
Glyoxalase (262 aa)
   
 
  0.783
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
 
  0.773
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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