• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr49385 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49385" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49385Predicted protein (1125 aa)    
Predicted Functional Partners:
Phatr50124
Predicted protein (1144 aa)
     
 
  0.993
Phatr25495
Predicted protein (460 aa)
     
 
0.958
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
 
  0.916
Phatr44910
Predicted protein (592 aa)
     
 
  0.908
Phatr20308
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
 
  0.900
Phatr43821
Predicted protein (631 aa)
       
 
  0.897
Phatr54677
DNA polymerase (1087 aa)
     
 
  0.896
Phatr26750
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (153 aa)
       
 
  0.891
Phatr54612
Ercc4-like protein (736 aa)
     
 
  0.871
Phatr31781
Predicted protein (379 aa)
   
 
  0.847
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]