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STRINGSTRING
Phatr49417 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49417" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49417Predicted protein (377 aa)    
Predicted Functional Partners:
Phatr21682
Predicted protein (416 aa)
     
   
  0.908
Phatr3621
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (259 aa)
       
 
  0.853
Phatr15286
Predicted protein (104 aa)
     
   
  0.790
Phatr42595
Predicted protein (476 aa)
           
  0.763
Phatr46848
Predicted protein (577 aa)
           
  0.762
Phatr33584
Predicted protein (797 aa)
           
  0.762
Phatr47967
tRNA (guanine(37)-N1)-methyltransferase 2; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family (587 aa)
     
   
  0.696
Phatr44373
tRNA (guanine(37)-N1)-methyltransferase 1; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family (436 aa)
     
   
  0.696
Phatr43438
Predicted protein (391 aa)
     
 
  0.665
Phatrdraft800
Serine/threonine-protein phosphatase (317 aa)
     
 
  0.602
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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