STRINGSTRING
Phatr49417 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49417" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49417Predicted protein (377 aa)    
Predicted Functional Partners:
Phatr30334
Predicted protein (645 aa)
       
 
  0.496
Phatr12174
Predicted protein (585 aa)
       
 
  0.496
Phatr3621
Predicted protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (259 aa)
       
 
  0.493
Phatr11741
Predicted protein (422 aa)
       
 
  0.472
Phatr48932
Predicted protein (721 aa)
       
      0.457
Phatr16283
Predicted protein (249 aa)
       
      0.457
Phatr1769
Predicted protein (395 aa)
       
      0.452
Phatr33584
Predicted protein (797 aa)
           
  0.428
Phatr21682
Predicted protein (416 aa)
           
  0.426
Phatrdraft800
Serine/threonine-protein phosphatase (317 aa)
       
 
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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