STRINGSTRING
Phatr49433 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49433" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49433Predicted protein (705 aa)    
Predicted Functional Partners:
Phatr51897
Predicted protein (531 aa)
     
 
  0.985
Phatr32646
Predicted protein (268 aa)
     
 
  0.984
Phatr47058
Predicted protein (606 aa)
     
      0.984
Phatr46994
Predicted protein (730 aa)
     
      0.980
Phatr45441
Predicted protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
 
  0.960
Phatr44687
Predicted protein (426 aa)
     
 
  0.960
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
      0.959
Phatr7810
Predicted protein (98 aa)
     
      0.959
Phatr25549
Predicted protein (512 aa)
     
      0.959
Phatr8777
Predicted protein (110 aa)
     
        0.958
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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