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Phatr49522 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49522" - 5-hydroxyisourate hydrolase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr495225-hydroxyisourate hydrolase (299 aa)    
Predicted Functional Partners:
Phatr40052
Predicted protein (377 aa)
   
  0.926
Phatr15968
Predicted protein (1387 aa)
 
 
    0.903
Phatr29736
Uricase (247 aa)
   
 
  0.812
Phatr52619
Purine permease (593 aa)
 
     
  0.736
Phatr1769
Predicted protein (395 aa)
 
   
  0.730
Phatr16991
Predicted protein (384 aa)
 
     
  0.724
Phatr31650
Solute carrier (590 aa)
         
  0.667
Phatr3787
Predicted protein (333 aa)
 
   
  0.660
Phatr49601
Alanine glyoxylate aminotransferase (465 aa)
   
   
  0.592
Phatr35101
Predicted protein (570 aa)
         
  0.524
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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