STRINGSTRING
Phatr49534 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49534" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49534Predicted protein (610 aa)    
Predicted Functional Partners:
Phatr44529
Predicted protein (360 aa)
   
          0.511
Phatr6402
Predicted protein (170 aa)
   
          0.507
Phatr31741
Predicted protein (148 aa)
   
          0.503
Phatr11883
Predicted protein (357 aa)
   
          0.502
Phatr46071
Predicted protein (180 aa)
   
          0.500
Phatrdraft1025
Tocopherol cyclase (515 aa)
   
          0.492
Phatr3296
Predicted protein (380 aa)
   
          0.474
Phatr3527
Predicted protein (233 aa)
   
          0.467
Phatr37858
Predicted protein (398 aa)
   
          0.461
Phatr48066
Predicted protein (293 aa)
   
          0.441
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (8%) [HD]