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Phatr49568 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49568" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49568Predicted protein (605 aa)    
Predicted Functional Partners:
Phatr50072
Predicted protein (505 aa)
       
 
  0.468
Phatr49073
Predicted protein (647 aa)
       
 
  0.468
Phatr47781
Predicted protein (437 aa)
       
 
  0.468
Phatr45260
Predicted protein (594 aa)
       
 
  0.468
Phatr42888
Predicted protein (564 aa)
       
 
  0.468
Phatr40731
Predicted protein (584 aa)
       
 
  0.468
ACL
Atp-citrate synthase (1082 aa)
     
   
  0.426
Phatr41702
Predicted protein (671 aa)
           
  0.424
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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