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STRINGSTRING
Phatr49580 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49580" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49580Predicted protein (247 aa)    
Predicted Functional Partners:
Phatr12807
Predicted protein (326 aa)
 
   
  0.456
Phatr41645
Predicted protein; Belongs to the complex I 20 kDa subunit family (166 aa)
   
 
  0.448
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
   
  0.437
Phatr43944
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain (493 aa)
     
 
  0.435
Phatr49226
Predicted protein (387 aa)
   
   
  0.433
Phatr22919
Predicted protein (260 aa)
     
 
  0.430
Phatr3527
Predicted protein (233 aa)
   
        0.427
Phatr16955
Predicted protein (231 aa)
   
          0.427
Phatr48524
Predicted protein (300 aa)
   
        0.424
Phatr28620
Predicted protein (136 aa)
     
      0.415
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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