Full Link:
STRINGSTRING
Phatr49601 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49601" - Alanine glyoxylate aminotransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49601Alanine glyoxylate aminotransferase (465 aa)    
Predicted Functional Partners:
GDCP
Glycine decarboxylase p-protein (1005 aa)
     
 
  0.756
Phatr32173
Predicted protein (575 aa)
     
 
  0.749
Phatr22113
Bifunctional aspartokinase (870 aa)
   
 
  0.745
Phatr34800
Predicted protein (387 aa)
   
 
  0.689
Phatrdraft475
Predicted protein (464 aa)
   
  0.637
Phatr34010
Predicted protein (475 aa)
   
  0.637
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine (464 aa)
   
 
  0.618
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine (501 aa)
   
 
  0.618
SHMT
Serine hydroxymethyltransferase; Interconversion of serine and glycine (473 aa)
   
 
  0.618
Phatr48946
2-hydroxyacid dehydrogenase (417 aa)
   
 
  0.617
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (3%)