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STRINGSTRING
Phatr49658 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49658" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49658Predicted protein (339 aa)    
Predicted Functional Partners:
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
   
   
  0.805
Phatr18027
Predicted protein (706 aa)
   
   
  0.805
Phatr41702
Predicted protein (671 aa)
   
   
  0.581
Phatr1690
Predicted protein (495 aa)
   
   
  0.489
Phatr31367
Predicted protein (819 aa)
         
  0.457
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.437
Phatr27735
Predicted protein (538 aa)
   
   
  0.406
Phatr18087
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (499 aa)
   
   
  0.405
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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