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Phatr49678 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49678" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49678Predicted protein (729 aa)    
Predicted Functional Partners:
Phatr31919
Predicted protein (305 aa)
       
      0.942
Phatr12292
50S ribosomal protein L33 (57 aa)
       
      0.942
Phatr11799
Predicted protein (84 aa)
       
      0.937
Phatr8720
Predicted protein (116 aa)
       
 
  0.836
Phatr27659
Predicted protein (157 aa)
       
 
  0.836
Phatr7358
Predicted protein (137 aa)
       
      0.836
Phatr28979
Predicted protein (164 aa)
       
      0.836
Phatr14412
Predicted protein (298 aa)
     
 
  0.801
Phatr14212
Predicted protein (308 aa)
     
 
  0.801
Phatr47449
Predicted protein (236 aa)
     
      0.800
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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