• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr49678 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49678" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49678Predicted protein (729 aa)    
Predicted Functional Partners:
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
           
  0.800
Phatrdraft1666
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (558 aa)
           
  0.798
Phatr23830
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (497 aa)
     
   
  0.779
Phatr28482
Predicted protein (602 aa)
     
   
  0.767
AAT_2
Aspartate aminotransferase (426 aa)
     
   
  0.766
AAT_1
Aspartate transaminase (435 aa)
     
   
  0.766
Phatr51005
DNA ligase (651 aa)
           
  0.734
Phatr10585
Predicted protein (337 aa)
           
  0.734
secA
Protein translocase subunit secA; Belongs to the SecA family (935 aa)
       
 
  0.708
Phatr29758
Aminopeptidase (895 aa)
     
   
  0.652
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]