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Phatr49748 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49748" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49748Predicted protein (2821 aa)    
Predicted Functional Partners:
Phatr26176
Predicted protein (408 aa)
     
 
  0.716
Phatr23920
Predicted protein (503 aa)
     
 
  0.703
Phatr16944
Predicted protein (438 aa)
     
 
  0.703
Phatr44242
Predicted protein (890 aa)
     
      0.619
CPS-II
Predicted protein (1542 aa)
     
        0.597
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
     
        0.597
Phatr41857
Predicted protein (546 aa)
     
 
  0.559
Phatr41659
Predicted protein (645 aa)
     
 
  0.559
Phatr17043
Predicted protein (559 aa)
     
 
  0.559
Phatr12095
Annotation not available (582 aa)
     
 
  0.559
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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