• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr49814 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49814" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49814Predicted protein (2034 aa)    
Predicted Functional Partners:
Phatr24978
Predicted protein (506 aa)
     
 
  0.783
Phatr29711
Predicted protein (221 aa)
       
 
  0.734
Phatr10862
annotation not available (309 aa)
     
 
  0.699
Phatr21030
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (390 aa)
     
 
  0.698
Phatr28794
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase (818 aa)
     
 
  0.682
Phatr27923
Predicted protein (623 aa)
     
 
  0.682
Phatr11649
Predicted protein; Belongs to the V-ATPase proteolipid subunit family (173 aa)
           
  0.619
Skp1_3
S-phase kinase-associated protein; Belongs to the SKP1 family (158 aa)
       
 
  0.459
Skp1;2
Predicted protein; Belongs to the SKP1 family (175 aa)
       
 
  0.459
Skp1_1
Predicted protein; Belongs to the SKP1 family (169 aa)
       
 
  0.459
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]