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Phatr49897 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49897" - Proteasome endopeptidase complex in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49897Proteasome endopeptidase complex; Belongs to the peptidase T1A family (236 aa)    
Predicted Functional Partners:
Phatrdraft866
Proteasome subunit beta; Belongs to the peptidase T1B family (248 aa)
   
 
  0.963
Phatr45122
Predicted protein; Belongs to the AAA ATPase family (421 aa)
   
 
  0.958
RPN12
Regulatory proteasome non-atpase subunit 12 (248 aa)
     
 
  0.952
Phatr30067
Predicted protein; Belongs to the AAA ATPase family (403 aa)
   
 
  0.950
RPN7
Regulatory proteasome non-atpase subunit 7 (330 aa)
     
 
  0.947
RPN8
Regulatory proteasome non-atpase subunit 8 (334 aa)
     
 
  0.938
Phatr14571
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (199 aa)
   
 
  0.930
RPN6
Regulatory proteasome non-atpase subunit 6 (405 aa)
     
 
  0.927
RPN5
Regulatory proteasome non-atpase subunit 5 (457 aa)
     
 
  0.921
Phatr30003
Predicted protein (204 aa)
   
 
  0.921
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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