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STRINGSTRING
Phatr49902 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49902" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49902Predicted protein (593 aa)    
Predicted Functional Partners:
Phatr21789
T-complex protein 1 subunit gamma; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (559 aa)
     
   
  0.858
Phatr18337
Predicted protein (596 aa)
           
  0.781
Phatr41702
Predicted protein (671 aa)
   
   
  0.691
Phatr54067
Histone-like transcription factor (130 aa)
     
   
  0.671
Phatr44902
Predicted protein (382 aa)
     
   
  0.637
Phatr18911
Aspartate--ammonia ligase (387 aa)
     
   
  0.637
GluRS_2
Glutamyl-trna synthase; Belongs to the class-I aminoacyl-tRNA synthetase family (588 aa)
     
 
  0.629
Phatr38963
D-tyrosyl-tRNA(Tyr) deacylase (167 aa)
     
   
  0.620
Phatr42051
Predicted protein (579 aa)
     
   
  0.606
Phatr41016
Predicted protein (460 aa)
     
   
  0.606
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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