• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr49903 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49903" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49903Predicted protein (654 aa)    
Predicted Functional Partners:
METH
Methionine synthase (1245 aa)
   
 
  0.964
Phatr54915
Eukaryotic cysteine synthase (356 aa)
   
  0.959
Phatr18319
Adenosylhomocysteinase (481 aa)
     
  0.958
Phatrdraft542
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family (336 aa)
   
  0.938
Cbs
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family (469 aa)
   
  0.938
Phatr9538
Predicted protein (593 aa)
   
  0.931
Phatr43697
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (356 aa)
   
  0.915
Phatr32849
Predicted protein (299 aa)
   
  0.915
Phatr28585
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (326 aa)
   
  0.915
Phatr10779
Predicted protein (359 aa)
   
  0.915
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]