STRINGSTRING
Phatr49903 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49903" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49903Predicted protein (654 aa)    
Predicted Functional Partners:
METH
Methionine synthase (1245 aa)
       
  0.976
Phatrdraft542
Cysteine synthase (336 aa)
   
  0.975
Cbs
Predicted protein (469 aa)
   
  0.975
Phatr54915
Eukaryotic cysteine synthase (356 aa)
   
  0.973
Phatr22113
Bifunctional aspartokinase (870 aa)
   
  0.951
Phatr18319
Adenosylhomocysteinase (481 aa)
     
 
  0.940
Phatr9538
Predicted protein (593 aa)
   
  0.940
sufS
Cysteine desulfurase for iron-sulfur cluster formation suf (496 aa)
   
 
  0.937
Phatr15917
Cystathionine gamma-lyase (392 aa)
   
   
 
0.917
Phatr43697
Branched-chain-amino-acid aminotransferase (356 aa)
       
  0.916
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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