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STRINGSTRING
Phatr49924 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr49924" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr49924Predicted protein; Belongs to the iron/ascorbate-dependent oxidoreductase family (564 aa)    
Predicted Functional Partners:
Phatr43326
Predicted protein (349 aa)
   
 
  0.721
Phatr1690
Predicted protein (495 aa)
   
   
  0.598
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.468
Phatr28359
Predicted protein (229 aa)
   
 
  0.449
Phatr38165
Predicted protein (232 aa)
   
 
  0.437
Phatr41702
Predicted protein (671 aa)
         
  0.435
Phatr43431
Predicted protein (471 aa)
     
   
  0.430
Phatr11894
Predicted protein (209 aa)
     
   
  0.430
Phatr28056
Predicted protein (757 aa)
   
   
  0.425
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
         
  0.416
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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