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STRINGSTRING
PHATR_4994 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_4994" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_4994Predicted protein (209 aa)    
Predicted Functional Partners:
Phatr2845
Predicted protein; Belongs to the protein kinase superfamily (268 aa)
   
 
  0.539
Phatr9200
Predicted protein (274 aa)
   
   
  0.449
Phatrdraft165
Predicted protein (222 aa)
   
     
  0.444
Phatrdraft152
Predicted protein (222 aa)
   
     
  0.444
Phatr11368
Predicted protein; Belongs to the protein kinase superfamily (246 aa)
 
     
  0.443
Phatr42850
Predicted protein (464 aa)
   
      0.440
Phatr13897
Predicted protein (108 aa)
   
      0.438
Phatr48170
Predicted protein; Belongs to the protein kinase superfamily (335 aa)
   
     
  0.436
Phatr13675
Predicted protein; Belongs to the protein kinase superfamily (228 aa)
   
          0.430
Phatr16036
Predicted protein (162 aa)
   
      0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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