STRINGSTRING
Phatr50019 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50019" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50019Predicted protein (722 aa)    
Predicted Functional Partners:
Phatr28794
Predicted protein; Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase (818 aa)
       
 
  0.675
SybD
Predicted protein (274 aa)
       
 
  0.594
SybA
Predicted protein (226 aa)
       
 
  0.594
CDKA2
Predicted protein (298 aa)
       
 
  0.568
Phatr44306
Predicted protein (865 aa)
       
 
  0.568
hCDK3
Predicted protein (295 aa)
       
 
  0.568
CDKA1
Predicted protein (290 aa)
       
 
  0.568
Phatr15852
Predicted protein (138 aa)
       
      0.561
Phatrdraft462
Predicted protein (555 aa)
     
 
  0.542
Phatr46692
Predicted protein (566 aa)
     
 
  0.542
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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