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STRINGSTRING
Phatr50019 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50019" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50019Predicted protein (722 aa)    
Predicted Functional Partners:
Phatr23830
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (497 aa)
   
   
  0.846
Phatr47323
Predicted protein (722 aa)
           
  0.710
Phatr46016
Predicted protein (491 aa)
           
  0.710
Phatr42424
Predicted protein (551 aa)
           
  0.710
Phatr12424
Predicted protein (109 aa)
           
  0.710
Phatr34810
Predicted protein (314 aa)
           
  0.679
Phatr47297
Predicted protein (416 aa)
           
  0.610
Phatr42872
Predicted protein (808 aa)
     
   
  0.608
AP3mu
Predicted protein; Belongs to the adaptor complexes medium subunit family (416 aa)
           
  0.582
Phatr49678
Predicted protein (729 aa)
     
   
  0.577
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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