• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr50048 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50048" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50048Predicted protein (225 aa)    
Predicted Functional Partners:
Phatr42364
Predicted protein (89 aa)
     
 
  0.994
Phatr10583
Predicted protein (94 aa)
     
 
  0.994
Phatr8840
Predicted protein (93 aa)
     
 
  0.994
Phatr8518
Predicted protein (66 aa)
     
 
  0.994
Phatr10494
Predicted protein (98 aa)
     
 
  0.994
Phatr7848
Predicted protein (135 aa)
     
 
  0.994
Phatr10752
Predicted protein (86 aa)
     
 
  0.958
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
       
 
  0.935
Phatr46543
Predicted protein (532 aa)
       
 
  0.933
Phatr46257
Predicted protein (238 aa)
     
 
  0.932
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (9%) [HD]