• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr50049 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50049" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50049Predicted protein (456 aa)    
Predicted Functional Partners:
Phatr25743
Predicted protein; Belongs to the DEAD box helicase family (414 aa)
     
 
  0.854
Phatr25184
Predicted protein (623 aa)
     
 
  0.854
Phatr47943
Predicted protein (1167 aa)
     
 
  0.748
Phatr44298
Predicted protein (1736 aa)
     
 
  0.748
Phatr41785
Predicted protein; Belongs to the DEAD box helicase family (370 aa)
     
 
  0.735
Phatr27735
Predicted protein (538 aa)
     
        0.727
Phatr46058
Formin like protein (2015 aa)
     
   
  0.674
Phatr23959
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (605 aa)
     
 
  0.660
Phatr9829
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (181 aa)
           
  0.617
Phatr44459
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (203 aa)
           
  0.617
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]