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STRINGSTRING
hPng1 protein (Phaeodactylum tricornutum) - STRING interaction network
"hPng1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hPng1Predicted protein (681 aa)    
Predicted Functional Partners:
hRad23
RAD23 (434 aa)
     
 
  0.966
hUfd2
Predicted protein (82 aa)
     
   
  0.890
RAD4
Xeroderma pigmentosum group (857 aa)
     
   
  0.797
Phatr44323
Predicted protein (614 aa)
     
 
  0.791
hNpl4
Predicted protein (473 aa)
           
  0.735
Phatr52346
alpha-1,2-Mannosidase; Mannosyl-oligosaccharide alpha-1,2-mannosidase; Belongs to the glycosyl hydrolase 47 family (509 aa)
           
  0.665
hHrd1
Predicted protein (632 aa)
       
 
  0.626
Phatr47933
Predicted protein (848 aa)
       
 
  0.626
sUfd1
Predicted protein (191 aa)
           
  0.621
hUfd1
Predicted protein (202 aa)
           
  0.621
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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