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STRINGSTRING
Phatr50120 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50120" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50120Predicted protein (167 aa)    
Predicted Functional Partners:
Phatr46372
Absent, small, or homeotic discs 2 (687 aa)
     
 
  0.993
Phatr48160
Predicted protein (677 aa)
     
 
  0.966
Phatr28743
Predicted protein (203 aa)
     
 
  0.956
Phatr6698
Predicted protein (106 aa)
       
 
  0.854
Phatr42687
Predicted protein (766 aa)
     
 
  0.802
Phatr23077
Predicted protein (379 aa)
     
 
  0.802
Phatr44165
Structural maintenance of chromosomes protein (1356 aa)
           
  0.791
Phatr6915
Predicted protein (139 aa)
       
 
  0.716
Phatr44935
Predicted protein (2187 aa)
       
 
  0.716
Phatr21456
Predicted protein (141 aa)
       
 
  0.716
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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