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Phatr50120 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50120" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50120Predicted protein (167 aa)    
Predicted Functional Partners:
Phatr46372
Absent, small, or homeotic discs 2 (687 aa)
       
  0.990
Phatr48160
Predicted protein (677 aa)
       
  0.917
Phatr6915
Predicted protein (139 aa)
       
  0.737
Phatr44935
Predicted protein (2187 aa)
       
  0.737
Phatr21456
Predicted protein (141 aa)
       
  0.737
Phatr15937
Predicted protein (154 aa)
       
  0.737
Phatr15913
Predicted protein (107 aa)
       
  0.737
Phatr23077
Predicted protein (379 aa)
       
  0.556
Phatr44863
Predicted protein (956 aa)
       
      0.501
Phatr20608
Predicted protein (830 aa)
       
      0.501
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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