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STRINGSTRING
Phatr50124 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50124" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50124Predicted protein (1144 aa)    
Predicted Functional Partners:
Phatr49385
Predicted protein (1125 aa)
     
 
  0.993
Phatr37723
Predicted protein (470 aa)
     
 
  0.949
POLA
DNA polymerase (1147 aa)
     
 
  0.943
Phatr43821
Predicted protein (631 aa)
     
 
  0.932
Phatr44708
Predicted protein (790 aa)
     
 
  0.928
Phatr54677
DNA polymerase (1087 aa)
     
 
  0.927
Phatr26750
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (153 aa)
       
 
  0.918
Phatr20308
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
     
 
  0.917
Phatr13221
Predicted protein (208 aa)
     
 
  0.915
Phatr52678
DNA polymerase (2155 aa)
     
 
  0.914
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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