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STRINGSTRING
Phatr50130 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50130" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50130Predicted protein (260 aa)    
Predicted Functional Partners:
Phatr45524
Predicted protein (805 aa)
     
 
  0.984
Phatr34712
Predicted protein (662 aa)
     
 
  0.980
Phatr9983
Predicted protein (123 aa)
     
 
  0.979
Phatr18599
Predicted protein (142 aa)
     
 
  0.979
Phatr45319
Predicted protein (1013 aa)
     
 
  0.978
Phatr43349
Predicted protein (651 aa)
     
 
  0.976
Phatr43576
Predicted protein (483 aa)
     
 
  0.964
Phatr46169
Predicted protein (520 aa)
     
 
  0.961
Phatrdraft224
Predicted protein (166 aa)
     
 
  0.958
Phatr8840
Predicted protein (93 aa)
     
 
  0.951
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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