STRINGSTRING
Phatr50130 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50130" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50130Predicted protein (260 aa)    
Predicted Functional Partners:
Phatr8518
Predicted protein (66 aa)
     
 
  0.945
Phatr10494
Predicted protein (98 aa)
       
      0.944
Phatr42364
Predicted protein (89 aa)
       
 
  0.856
Phatr7848
Predicted protein (135 aa)
       
 
  0.830
Phatr9319
Predicted protein (96 aa)
     
 
  0.774
Phatr45020
Predicted protein (592 aa)
     
 
  0.774
Phatr18599
Predicted protein (142 aa)
       
 
  0.679
Phatr43576
Predicted protein (483 aa)
     
 
  0.669
Phatr49469
Predicted protein (522 aa)
     
      0.668
Phatr8840
Predicted protein (93 aa)
       
 
  0.666
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (18%) [HD]