STRINGSTRING
Phatr50132 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50132" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50132Predicted protein (1477 aa)    
Predicted Functional Partners:
Phatr16357
Predicted protein (268 aa)
     
  0.993
Phatr14090
Predicted protein (219 aa)
     
  0.967
Phatr13582
Predicted protein (79 aa)
     
  0.967
Phatr21660
Predicted protein (2400 aa)
     
  0.781
Phatr20716
Predicted protein (138 aa)
       
  0.776
Phatr44767
Predicted protein (1557 aa)
     
  0.754
Phatr43905
Predicted protein (1038 aa)
     
  0.754
Phatr43802
Predicted protein (1189 aa)
     
  0.754
Phatr29532
Predicted protein (237 aa)
     
  0.754
Phatr27246
Predicted protein (283 aa)
     
  0.754
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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