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Phatr50135 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50135" - Serine/threonine-protein kinase RIO1 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50135Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family (626 aa)    
Predicted Functional Partners:
Phatr31725
Predicted protein (629 aa)
     
 
  0.912
Phatr30019
Predicted protein (299 aa)
   
 
  0.885
Phatr9929
Predicted protein (196 aa)
   
 
  0.885
Phatr6258
Predicted protein (205 aa)
     
   
  0.806
Phatr13820
Predicted protein (282 aa)
     
 
  0.745
Phatr37596
Predicted protein (531 aa)
     
   
  0.732
Phatr16141
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (373 aa)
     
 
  0.682
Phatr15848
Predicted protein (206 aa)
 
   
  0.675
Phatr7072
Predicted protein (176 aa)
     
   
  0.673
Phatr45441
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
   
 
  0.647
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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