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Phatr50138 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50138" - Sister chromatid cohesion protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50138Sister chromatid cohesion protein (1699 aa)    
Predicted Functional Partners:
SMC3
Predicted protein (1232 aa)
     
 
  0.984
Phatr54417
Cohesin (1455 aa)
     
 
  0.981
Phatrdraft1590
Predicted protein (958 aa)
     
 
  0.978
SMC1
Predicted protein (1237 aa)
     
 
  0.969
SMC5
Predicted protein (1099 aa)
     
 
  0.966
Phatr44595
Mitotic cohesin (663 aa)
     
 
  0.963
Phatr44165
Structural maintenance of chromosomes protein (1356 aa)
     
 
  0.958
Phatr48451
Separase protein (2039 aa)
     
 
  0.955
Phatr43362
Predicted protein (398 aa)
     
 
  0.936
SMC2
Structural maintenance of chromosomes protein (1213 aa)
     
 
  0.863
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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