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Phatr50206 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50206" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50206Predicted protein (223 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
   
  0.732
Phatr42978
Predicted protein (632 aa)
     
   
  0.533
Phatr46564
Predicted protein (448 aa)
     
  0.531
Phatr46561
Predicted protein (453 aa)
     
  0.531
Phatr46389
Predicted protein (647 aa)
     
  0.531
Phatr45904
Predicted protein (584 aa)
     
  0.531
Phatr31525
Predicted protein (1104 aa)
     
  0.531
Phatr16168
Predicted protein (344 aa)
     
  0.531
Phatr10757
Predicted protein (345 aa)
       
      0.529
Phatr49638
Predicted protein (611 aa)
       
    0.525
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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