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STRINGSTRING
Phatr50228 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50228" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50228Predicted protein (904 aa)    
Predicted Functional Partners:
Phatr45009
Predicted protein (498 aa)
     
 
  0.923
Phatr47054
Predicted protein (450 aa)
     
 
  0.917
Phatr45779
Predicted protein (343 aa)
     
 
  0.912
Phatr42944
Predicted protein (1422 aa)
     
 
  0.910
Phatr10199
Predicted protein (203 aa)
     
 
  0.883
Phatr42892
Predicted protein; Belongs to the PI3/PI4-kinase family (4067 aa)
     
 
  0.830
Phatr1785
Predicted protein (433 aa)
     
 
  0.764
Phatr47951
Predicted protein (274 aa)
     
 
  0.716
Phatr36606
Predicted protein (342 aa)
     
 
  0.716
Phatr50377
Predicted protein (755 aa)
     
   
  0.677
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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