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STRINGSTRING
Phatr50281 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50281" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50281Predicted protein (417 aa)    
Predicted Functional Partners:
Phatr49112
Predicted protein (494 aa)
   
  0.981
Phatr6848
Predicted protein (125 aa)
   
   
  0.921
Phatr13175
Predicted protein (391 aa)
   
   
  0.886
Phatr51609
Predicted protein (529 aa)
   
   
  0.868
Phatr16540
Predicted protein; Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family (432 aa)
   
 
  0.838
Fum
Fumarate hydratase (462 aa)
     
  0.821
SDH1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (638 aa)
   
 
  0.820
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (273 aa)
   
 
    0.814
Phatr10356
Succinate dehydrogenase cytochrome b subunit (125 aa)
   
 
    0.810
FUM1
Precursor of fumarase fumarase (567 aa)
       
    0.802
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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