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STRINGSTRING
Phatr50309 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50309" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50309Predicted protein (228 aa)    
Predicted Functional Partners:
Phatr14572
Predicted protein (219 aa)
     
  0.998
Phatr13192
Predicted protein (74 aa)
     
 
  0.991
Phatr9319
Predicted protein (96 aa)
     
  0.987
Phatr16704
Predicted protein (1045 aa)
     
 
  0.983
Phatr49469
Predicted protein (522 aa)
     
 
  0.983
Phatr17408
Predicted protein (1303 aa)
     
 
  0.971
Phatr46169
Predicted protein (520 aa)
     
 
  0.971
Phatrdraft1638
Predicted protein (548 aa)
     
 
  0.963
Phatr51283
Predicted protein (328 aa)
     
 
  0.962
Phatr12161
Predicted protein (250 aa)
     
 
  0.961
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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