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Phatr50310 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50310" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50310Predicted protein (699 aa)    
Predicted Functional Partners:
Phatr14572
Predicted protein (219 aa)
       
    0.686
Phatr23164
Predicted protein (489 aa)
     
 
  0.665
MYT1
Predicted protein (1108 aa)
       
      0.629
Phatr43211
Predicted protein (826 aa)
     
    0.587
helicase_4
Predicted protein (595 aa)
     
    0.514
Phatr45809
Predicted protein (680 aa)
     
    0.505
Phatr13192
Predicted protein (74 aa)
     
    0.496
Phatr11785
Predicted protein (631 aa)
     
 
    0.471
Phatr14983
Predicted protein (380 aa)
     
    0.466
Phatr26061
Predicted protein (552 aa)
     
    0.438
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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