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Phatr50321 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50321" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50321Predicted protein (424 aa)    
Predicted Functional Partners:
Phatr46564
Predicted protein (448 aa)
     
 
  0.458
Phatr46561
Predicted protein (453 aa)
     
 
  0.458
Phatr46389
Predicted protein (647 aa)
     
 
  0.458
Phatr45904
Predicted protein (584 aa)
     
 
  0.458
Phatr31525
Predicted protein (1104 aa)
     
 
  0.458
Phatr16168
Predicted protein (344 aa)
     
 
  0.458
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
           
  0.428
Phatr42566
Predicted protein (220 aa)
       
  0.411
Phatr11781
Predicted protein (106 aa)
       
  0.411
Phatr17936
Predicted protein (206 aa)
         
  0.408
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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