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UBA1 protein (Phaeodactylum tricornutum) - STRING interaction network
"UBA1" - Ubiquitin-activating enzyme E1, protein 1 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA1Ubiquitin-activating enzyme E1, protein 1 (179 aa)    
Predicted Functional Partners:
UBC1
Ubiquitin-conjugating enzyme 1; Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (197 aa)
   
 
  0.888
Phatr28433
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (167 aa)
   
 
  0.879
Phatr26750
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (153 aa)
   
 
  0.844
Phatr18008
Ubiquitinyl hydrolase 1; Ubiquitin carboxyl-terminal hydrolase (844 aa)
     
 
  0.819
hUba1
Ubiquitin-activating enzyme E1, protein 2; Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family (1050 aa)
         
 
0.800
hRad23
RAD23 (434 aa)
     
 
  0.767
Phatr44323
Predicted protein (614 aa)
     
 
  0.762
Phatr48810
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (220 aa)
     
 
  0.761
Phatr31584
Predicted protein; Belongs to the peptidase C19 family (618 aa)
     
 
  0.724
Phatr27762
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
   
 
  0.720
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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