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STRINGSTRING
Phatr50440 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr50440" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr50440Predicted protein (965 aa)    
Predicted Functional Partners:
Phatr16141
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (373 aa)
     
   
  0.885
Phatr52260
Predicted protein (107 aa)
     
 
  0.857
Phatr8457
Predicted protein (59 aa)
           
  0.669
Phatr47951
Predicted protein (274 aa)
           
  0.645
Phatr36606
Predicted protein (342 aa)
           
  0.645
Phatr10628
Serine/threonine-protein kinase PLK (575 aa)
     
   
  0.583
H2A-m1
Histone H2A (138 aa)
           
  0.582
Phatr5651
14-3-3-like protein; Belongs to the 14-3-3 family (241 aa)
       
 
  0.520
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
     
 
  0.490
Phatr54577
Helicase_2 (790 aa)
     
 
  0.477
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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